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SAMPLES (12)
mace:id
Technology # Array version
# SEVERAL # # SEVERAL
Affymetrix # HGU 133 Plus 2
Affymetrix # MGU 74 Av2
Affymetrix # MoGene V1.0st
Affymetrix # Mouse 430A
Affymetrix # Rhesus
Agilent # AGHUMAN
Agilent # AGMOUSE
Applied Biosystems # HGS V1
Applied Biosystems # HGS V2
Applied Biosystems # MGS V1
Applied Biosystems # MGS V2
Applied Biosystems # RGS V1
Genopole SXB # SXBH1
Genopole SXB # SXBH2
Genopole SXB # SXBH3
Genopole SXB # SXBM1
Genopole SXB # SXBM2
Genopole SXB # SXBM3
Illumina # HumanHT-12 V4.0
Illumina # HUMANWG6v3
Illumina # MouseWG-6 v2.0
Species
# SEVERAL
Cercocebus atys
Chlorocebus sabaeus
Homo sapiens
Macaca mulatta
Macaca Nemestrina
Mus musculus
Pan troglodytes
Rattus norvegicus
Organ
# OTHER
# SEVERAL
Adenoid
Adrenal gland
Bladder
Blood
Blood vessel
Brain
Bronchi
Cervix
Embryo
Esophagus
Gallblader
Heart
Hypotalamus
Intestine
Kidney
Larynx
Liver
Lung
Lymph node
Mammary gland
Mussle
Pancreas
Parathyroid
Penis
Pharynx
Pineal gland
Pituitary gland
Prostate
Salivary gland
Seminal vesicle
Skin
Spinal cord
Spleen
Stomach
Test
Thymus
Thyroid
Tonsil
Trachea
Ureter
Uterus
Vagina
Vas deferens
Tissue
# OTHER
# SEVERAL
Bone Marrow
Connective - Dense Irregular Tissue (Collagen)
Connective - Dense Regular Tissue (Collagen)
Connective - Dense Regular Tissue (Elastic)
Connective - Loose Tissue (Adipose)
Connective - Loose Tissue (Areolar)
Connective - Loose Tissue (Reticular)
Epithelium - Simple (Columnar)
Epithelium - Simple (Cuboidal)
Epithelium - Simple (Pseudostratified)
Epithelium - Simple (Squamous)
Epithelium - Stratified (Columnar / Cuboidal)
Epithelium - Stratified (Squamous: Keratinized)
Epithelium - Stratified (Squamous: NonKeratinized)
Fluid - Blood
Fluid - Lymph
Gland - Endocrine Glands
Gland - Exocrine Glands (Ducts and Tubules)
Muscle - Non-striated
Muscle - Striated (Cardiac)
Muscle - Striated (Skeletal)
Nervous - Nerves
Nervous - Neurons (Bipolar)
Nervous - Neurons (Multipolar)
Nervous - Neurons (Unipolar)
Nervous - Receptors
Placenta
Stem cells
Supportive - Cartilage (Elastic)
Supportive - Cartilage (Fibrocartilage)
Supportive - Cartilage (Hyaline)
Supportive - Osseous (Compact)
Supportive - Osseous (Spongey)
Physiopathology
# HEALTHY
# OTHER
# SEVERAL
apoptosis
autocrine signaling
differentiation
drug response
electric response
endocrine signaling
environemental response
homeostasis
immune response
mechanic response
necrosis
paracrine signaling
proliferation
Type
# OTHER
# SEVERAL
conditional knockout
drug stress
electric stress
environmental stress
ground state
immune stress
knockdown RNAi
knockout
mechanic stress
stable transfection
time course
transient transfection
Name
Attached file
download project data file ('.map')
Attached file (see:
ruid website
)
download project data file ('.map' RUID converted)
Attached file
download raw data files ('.zip')
Attached file
download annotation files ('.zip')
User name
Arndt Benecke
Email
arndt@ihes.fr
Phone / Fax number
+33160926665 / +33160926609
Location
Institut des Hautes Etudes Scientifiques (Integrative Biology) - 35, route de Chartres - 91440 Bures sur Yvette, France
Scientific description
Notch pathway controls multiple cellular processes, such as differentiation, cell proliferation and apoptosis. Its activation is based on the ligand binding to a Notch receptor after which, the Notch intracellular active domain (NIC) is released through cleavage mediated by ?-secretase. Upon cleavage, NIC translocate to the nucleus where it binds the CSL-complex and actives the transcription of its target genes, like Hes1. TAF6 is a subunit of the TFIID basal transcription complex that plays an important role in the regulation of RNA polymerase II transcription. TAF6? is a specialized isoform of TAF6 that can induce apoptosis and induces the expression of Notch target genes. This study aims to explore the potential crosstalk between TAF6? and Notch signalling pathways and its impact on apoptosis. Our data shows, for the first time that the Notch pathway is activated by TAF6? in several models of cancer and that association, contributes to apoptosis in cervical cancer.
Technical description
To validate the impact of TAF6? expression on the Notch pathway, we performed microarray analysis. TAF6? induction, mediated through transfection of SSO (Splice-Switching oligonucleotides), revealed a ?-secretase–dependent induction of Notch target genes in HeLa cells. Flow cytometry analysis further showed that TAF6?-dependent apoptosis is reduced by treatment with ?-secretase inhibitors. Immunofluorescence analysis revealed that TAF6? induced translocation of NIC-2 to the nucleus. Finally, qPCR showed that Notch target gene expression is increased in several cancer cell lines in response to TAF6? induction.
Reference
Edith M. Alvarado, Emanuelle Wilhelm, Hélène Léger, Arndt G. Benecke, Brendan Bell. Crosstalk between TAF6 and Notch signaling pathways. Submitted.